Package: Orangutan 2.1.0
Orangutan: Automated Analysis of Phenotypic Data
Provides functions to analyze and visualize meristic, mensural, and categorical phenotypic data in a comparative framework. The package implements an automated pipeline that summarizes traits, identifies diagnostic variables among groups, performs multivariate and univariate statistical analyses, and produces publication-ready graphics. Earlier implementation are described in Torres (2025) <doi:10.64898/2025.12.18.695244> (v1.0.0) and Torres (2026) <doi:10.1002/ece3.73111> (v2.0.0).
Authors:
Orangutan_2.1.0.tar.gz
Orangutan_2.1.0.zip(r-4.7)Orangutan_2.1.0.zip(r-4.6)Orangutan_2.1.0.zip(r-4.5)
Orangutan_2.1.0.tgz(r-4.6-any)Orangutan_2.1.0.tgz(r-4.5-any)
Orangutan_2.1.0.tar.gz(r-4.7-any)Orangutan_2.1.0.tar.gz(r-4.6-any)
Orangutan_2.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
Orangutan/json (API)
| # Install 'Orangutan' in R: |
| install.packages('Orangutan', repos = c('https://metalofis.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/metalofis/orangutan-r/issues
Last updated from:d40126c1d0. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 145 | ||
| source / vignettes | OK | 181 | ||
| linux-release-x86_64 | OK | 146 | ||
| macos-release-arm64 | OK | 127 | ||
| macos-oldrel-arm64 | OK | 105 | ||
| windows-devel | OK | 88 | ||
| windows-release | OK | 89 | ||
| windows-oldrel | OK | 94 | ||
| wasm-release | OK | 120 |
Exports:run_orangutan
Dependencies:ade4adegenetapebase64encbootbslibcacachemcliclustercodetoolscolorspacecommonmarkcorrrcpp11digestdplyrdunn.testfarverfastmapfontawesomeforeachfsgclusgenericsggplot2ggrepelgluegtablehtmltoolshttpuvigraphisobanditeratorsjquerylibjsonlitelabelinglaterlatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemultcompViewnlmeotelpermutepillarpixmappkgconfigplyrpromisespurrrqapR6rappdirsRColorBrewerRcppRcppArmadilloregistryreshape2rlangS7sassscalesscrutinysegmentedseqinrseriationshinysourcetoolsspstringistringrtibbletidyrtidyselectTSPutf8vctrsveganviridisLitewithrxtable
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Run multivariate statistical tests | multivariate_tests |
| Run Orangutan | run_orangutan |
